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Remodeling How Biological Memory Works

Popular models of how “memory” works makes as much sense to me as most theodicies. Even with constructs like engrams, where we assume that certain configuration of electrical pulses get magically integrated into something coherent somewhere else in the network is really incoherent in the face of the evidence. “Memory” is a consistent and necessary …

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Behavior isn’t magic.

Salience provides the impulse, analogous to “flight/fight/freeze”. Valence tuning provides the behavior, “Run there”, “Yell”, “Play Dead”. Valence can modify the salience pulse, e.g. “freeze” can be modified to “fight” with high enough metabolic output through “positive” valence channels. Valence and salience combinations can produce unstable/highly error prone combinations which are “felt”, e.g. anxiety. For …

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Interactions Dump

Redefining the Catalytic HECT Domain Boundaries for the HECT E3 Ubiquitin Ligase Family Structural and mutational analysis of MazE6-operator DNA complex provide insights into autoregulation of toxin-antitoxin systems Widespread autogenous mRNA–protein interactions detected by CLIP-seq Pronounced sequence specificity of the TET enzyme catalytic domain guides its cellular function Changes in chromatin accessibility are not concordant …

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Neurotransmitters as “training chemicals”

Are dopamine, serotonin, etc “training” chemicals that help establish pathways rather than active signalling chemicals? Specifically, they work like something closer to “traffic lights” while peptide binding to astrocytes determine the actual “information” being transmitted. This indicates that the integrative process is mostly a reconfiguration of peptides integrated upward. Mechanically, this provides an actual non-magical …

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Neurotensin Dump

Editorial: CNS pain circuits in health and disease – The perception of pain is gated by level of associated valence. Neurokinin-1 Receptor-Immunopositive Neurons in the Medullary Dorsal Horn Provide Collateral Axons to both the Thalamus and Parabrachial Nucleus in Rats – Tree walk, supporting the medulla as initiation point of salience. So, it looks like …

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